Aarhus University
General Information
| Email: | Jade Cheng 成玉 <jade.cheng@cs.au.dk> |
| Curriculum Vitae: | jade-cheng-cv.pdf |
| Website: | www.jade-cheng.com |
| PhD thesis: | Learning with Admixture: Modeling, Optimization, and Applications |
| PhD defense: | Predicting evolution using modeling and optimization |
Hvorkommerdufra
Coalescent Hidden Markov Model
Heuristic based numerical optimization
2015 Center for Theoretical Evolutionary Genomics, UC Berkeley
2015 Probabilistic Modeling in Genomics, Cold Spring Harbor Laboratory New York
Admixture, Covariances, and Selection
MLE for Individual Ancestries — Overview
Software
‘Ohana, a suite of software to infer population structure, admixture, and selection
Jocx, admixture coalescence hidden Markov modeling and optimizations
nemetree, an interactive visualization for phylogenetic trees
nemepos, an interactive visualization for partially ordered sets