jade::basic_neoscan< TValue >::output Struct Reference

Output for one column. More...

#include <jade.neoscan.hpp>

Collaboration diagram for jade::basic_neoscan< TValue >::output:

Public Member Functions
value_type	compute_lle_ratio () const
std::string	to_string () const
	Returns the delta, global_lle, local_lle, and computed log-likelihood ratio converted to high-precision strings and joined by the tab character. The returned string does not include and end-of-line character. More...

Data Fields
value_type	delta
	The delta. More...
value_type	global_lle
	The global lle. More...
value_type	local_lle
	The local lle. More...

Detailed Description

template<typename TValue>
struct jade::basic_neoscan< TValue >::output

Output for one column.

Definition at line 48 of file jade.neoscan.hpp.

Member Function Documentation

compute_lle_ratio()

template<typename TValue >

value_type jade::basic_neoscan< TValue >::output::compute_lle_ratio ( ) const

inline

Returns

The computed log-likelihood ratio, i.e. 2.0 * (local_lle - global_lle).

Definition at line 58 of file jade.neoscan.hpp.

            {
                return value_type(2.0) * (local_lle - global_lle);
            }

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to_string()

template<typename TValue >

std::string jade::basic_neoscan< TValue >::output::to_string ( ) const

inline

Returns the delta, global_lle, local_lle, and computed log-likelihood ratio converted to high-precision strings and joined by the tab character. The returned string does not include and end-of-line character.

Returns

A string representing the output values.

Definition at line 71 of file jade.neoscan.hpp.

            {
                std::ostringstream out;
                matrix_type::set_high_precision(out);
                out << std::showpos
                    << delta      << '\t'
                    << global_lle << '\t'
                    << local_lle  << '\t'
                    << compute_lle_ratio();
                return out.str();
            }

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Field Documentation

delta

template<typename TValue >

value_type jade::basic_neoscan< TValue >::output::delta

The delta.

Definition at line 50 of file jade.neoscan.hpp.

global_lle

template<typename TValue >

value_type jade::basic_neoscan< TValue >::output::global_lle

The global lle.

Definition at line 51 of file jade.neoscan.hpp.

local_lle

template<typename TValue >

value_type jade::basic_neoscan< TValue >::output::local_lle

The local lle.

Definition at line 52 of file jade.neoscan.hpp.

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The documentation for this struct was generated from the following file:

• jade.neoscan.hpp